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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs8142939 chr22:44745442 C/T ACO2 chr22:41865129-41924993:+ -0.46 -6.16 1.54E-9 Box Plot
THCA rs8142939 chr22:44745442 C/T AP1B1 chr22:29723669-29819168:- -0.55 -5.93 5.72E-9 Box Plot
THCA rs8142939 chr22:44745442 C/T ASCC2 chr22:30184597-30234293:- -0.52 -6.32 6.1E-10 Box Plot
THCA rs8142939 chr22:44745442 C/T C22orf13 chr22:24936406-24951903:- -0.56 -6.74 4.59E-11 Box Plot
THCA rs8142939 chr22:44745442 C/T FBXO7 chr22:32870663-32894816:+ -0.45 -5.88 7.84E-9 Box Plot
THCA rs8142939 chr22:44745442 C/T GGA1 chr22:38004482-38029571:+ -0.55 -6.59 1.17E-10 Box Plot
THCA rs8142939 chr22:44745442 C/T GTPBP1 chr22:39101728-39134304:+ -0.55 -6.66 7.7E-11 Box Plot
THCA rs8142939 chr22:44745442 C/T HIC2 chr22:21771693-21805752:+ -0.46 -6.41 3.52E-10 Box Plot
THCA rs8142939 chr22:44745442 C/T HPS4 chr22:26839389-26879803:- -0.55 -6.2 1.24E-9 Box Plot
THCA rs8142939 chr22:44745442 C/T HSCB chr22:29138019-29153503:+ -0.46 -5.88 7.83E-9 Box Plot
THCA rs8142939 chr22:44745442 C/T MED15 chr22:20850200-20941919:+ -0.38 -5.97 4.59E-9 Box Plot
THCA rs8142939 chr22:44745442 C/T MKL1 chr22:40806285-41032706:- -0.53 -6.41 3.57E-10 Box Plot
THCA rs8142939 chr22:44745442 C/T NHP2L1 chr22:42069934-42086508:- -0.5 -5.88 7.59E-9 Box Plot
THCA rs8142939 chr22:44745442 C/T NIPSNAP1 chr22:29950797-29977326:- -0.66 -6.26 8.49E-10 Box Plot
THCA rs8142939 chr22:44745442 C/T NOL12 chr22:38077680-38089485:+ -0.48 -7.33 1.02E-12 Box Plot